Page 295 - Microbial methane cycling in a warming world From biosphere to atmosphere Michiel H in t Zandt

Niemann H, Elvert M, Hovland M et al. Methane emission and consumption at a North Sea gas seep (Tommeliten area). Biogeosciences 2005;2:335–51.
Nimagen. RC-PCR for NGS library generation. 2020.
Nisbet EG, Manning MR, Dlugokencky EJ et al. Very strong atmospheric methane growth in the 4 years 2014–
2017: Implications for the Paris Agreement. Global Biogeochem Cycles 2019;33:318–42.
Nkamga VD, Drancourt M. Methanomassiliicoccus. Bergey’s Manual of Systematics of Archaea and Bacteria.
Wiley, 2016, 1–7.
Nobu MK, Dodsworth JA, Murugapiran SK et al. Phylogeny and physiology of candidate phylum “Atribacteria”
(OP9/JS1) inferred from cultivation-independent genomics. ISME J 2016a;10:273–86.
Nobu MK, Narihiro T, Kuroda K et al. Chasing the elusive Euryarchaeota class WSA2: Genomes reveal a
uniquely fastidious methyl-reducing methanogen. ISME J 2016b;10:2478–87.
Noguchi M, Kurisu F, Kasuga I et al. Time-resolved DNA stable isotope probing links Desulfobacterales- and Coriobacteriaceae-related bacteria to anaerobic degradation of benzene under methanogenic conditions.
Microbes Environ 2014;29:191–9.
Norði K à., Thamdrup B, Schubert CJ. Anaerobic oxidation of methane in an iron-rich Danish freshwater lake
sediment. Limnol Oceanogr 2013;58:546–54.
Nozhevnikova AN, Zepp K, Vazquez F et al. Evidence for the existence of psychrophilic methanogenic
communities in anoxic sediments of deep lakes. Appl Environ Microbiol 2003;69:1832–5.
Nurk S, Meleshko D, Korobeynikov A et al. metaSPAdes: A new versatile metagenomic assembler. Genome
Res 2017;27:824–34.
Ogier JC, Pagès S, Galan M et al. rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing. BMC Microbiol 2019;19, DOI: 10.1186/s12866-019-1546-z.
Ohm RA, Riley R, Salamov A et al. Genomics of wood-degrading fungi. Fungal Genet Biol 2014;72:82–90. Oksanen AJ, Blanchet FG, Friendly M et al. Package ‘vegan’, community ecology package. CRAN 2017. Oksanen J, Blanchet FG, Friendly M et al. Vegan: Community ecology package. 2018.
Olefeldt D, Goswami S, Grosse G et al. Circumpolar distribution and carbon storage of thermokarst landscapes.
Nat Commun 2016;7:1–11.
Op den Camp HJM, Islam T, Stott MB et al. Environmental, genomic and taxonomic perspectives on
methanotrophic Verrucomicrobia. Environ Microbiol Rep 2009;1:293–306.
Oppo D, De Siena L, Kemp DB. A record of seafloor methane seepage across the last 150 million years. Sci Rep
2020;10:1–12.
Oremland RS, Polcin S. Methanogenesis and sulfate reduction: Competitive and noncompetitive substrates in
estuarine sediments. Appl Environ Microbiol 1982;44:1270–6.
Orsi WD, Vuillemin A, Rodriguez P et al. Metabolic activity analyses demonstrate that Lokiarchaeon exhibits
homoacetogenesis in sulfidic marine sediments. Nat Microbiol 2020;5:248–55.
Oshkin IY, Beck DA, Lamb AE et al. Methane-fed microbial microcosms show differential community
dynamics and pinpoint taxa involved in communal response. ISME J 2015;9:1119–29. Osterkamp TE. Characteristics of the recent warming permafrost in Alaska. J Geophys Res Earth Surf
2007;112:1–10.
Osterkamp TE, Jorgenson MT, Schuur EAG et al. Physical and ecological changes associated with warming
permafrost and thermokarst in Interior Alaska. Permafr Periglac Process 2009;20:235–56.
Osterkamp TE, Viereck L, Shur Y et al. Observations of thermokarst and its impact on boreal forests in Alaska,
U.S.A. Arctic, Antarct Alp Res 2000;32:303–15.
Osudar R, Liebner S, Alawi M et al. Methane turnover and methanotrophic communities in arctic aquatic
R
ecosystems of the Lena Delta, Northeast Siberia. FEMS Microbiol Ecol 2016;92:fiw116.
Oswald K, Milucka J, Brand A et al. Aerobic gammaproteobacterial methanotrophs mitigate methane emissions
from oxic and anoxic lake waters. Limnol Oceanogr 2016;61:101–18.
Overduin PP, Liebner S, Knoblauch C et al. Methane oxidation following submarine permafrost degradation:
Measurements from a central Laptev Sea shelf borehole. J Geophys Res Biogeosciences 2015;120:965–78.
Palacios PA, Snoeyenbos-West O, Löscher CR et al. Baltic Sea methanogens compete with acetogens for electrons from metallic iron. ISME J 2019;13:3011–23.
Papendick SL, Downs KR, Vo KD et al. Biogenic methane potential for Surat Basin, Queensland coal seams. Int J Coal Geol 2011;88:123–34.
293