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CODING AND SMALL NON-CODING TRANSCRIPTIONAL LANDSCAPE OF TSC
Supplementary information
Supplementary Table 1 Differentially expressed cell-specific genes.
Cell type Direction Genes
Microglia Up AIF1 C1QA C1QB C1QC CCL2 CH25H CX3CR1 HCK IL1A IRF5 ITGB2 LILRA4 LPAR5 MS4A6A PIK3R5 PLVAP RGS10 RNASE6 S100A11 SER-
PINA1 TNFRSF12A TREM2 TYROBP
Microglia Down RP11-108M9.3
Astrocytes Up AEBP1 APLNR C1QTNF5 C4B COPZ2 GFAP ITGB4 PLEKHA4
Astrocytes Down GJB2 PRSS35
Neurons Up AC144835.1 ARHGAP36 ARRDC4 C21orf88 PPP1R17
Neurons Down C11orf95 C1orf95 CRH IGFBP3 SLC22A8 SSTR1
Oligodendrocytes Up CHI3L2 FAM46B PIFO
Oligodendrocytes Down LPPR3
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